Clinical Genomics and NGS

Course Directors
- Christian Gilissen (Nijmegen, the Netherlands)
- Alexander Hoischen (Nijmegen, the Netherlands)
- Tommaso Pippucci (Bologna, Italy)
- Malte Spielmann (Lübeck, Germany)
General Information
Dear participants,
The 37th course on Clinical Genomics and NGS is planned as a live conference in Bertinoro, Italy from May 4 – 9, 2025 (see WEBSITE for details).
In addition, a virtual attendance will be possible as follows:
- Availability of pre-recorded talks of the morning sessions on Sunday, May 4, 2025 to Thursday, May 8, 2025 for registered (virtual) participants on May 4 where the course starts.
- Participants registered for the virtual edition will receive access to the pre-recordings via a dedicated link.
- On the video platform, it is possible to ask questions under each video, which will be answered by the respective speakers during the event.
Important note: no access to live talks will be possible.
Programme
Saturday, May 3, 2025:
Arrival and dinner in cantina
Sunday, May 4, 2025 - Morning Lectures:
Medical Genetics concepts and principles
08:30-08:45 | Participants Registration | |
08:45-09:00 | Introduction to the course | T. Pippucci |
09:00-09:45 | Why Medical Genomics Matters | D. Donnai |
09:45-10:30 | The architecture of monogenic disease | H. Brunner |
10:30-11:00 | Coffee break | |
11:00-11:45 | Cytogenetics and arrays | E. Klopocki |
11:45-12:30 | Complex disorders, classical gene identification and polygenic scores | M. Nothnagel |
12:30-13:00 | Discussion of the morning lectures | |
13:00-14:00 | Lunch Break |
Afternoon Workshops
Session I 14:00 – 15:30 | ||
Mutation patterns | H. Brunner | |
Interpreting CNVs for beginners (Computer Room) | E. Klopocki | |
GWAS analysis and polygenic scores for beginners | M. Nothnagel | |
Population genomic screening | D. Donnai & A. Lucassen | |
15:30-16:00 | Coffee Break | |
Session II 16:00 – 17:30 | ||
Mutation patterns | H. Brunner | |
Interpreting CNVs for beginners (Computer Room) | E. Klopocki | |
GWAS analysis and polygenic scores for beginners | M. Nothnagel | |
Population genomic screening | D. Donnai & A. Lucassen |
Monday, May 5, 2025 - Morning Lectures:
Basics of NGS for Mendelian disorders
08:55-09:00 | General Announcements | |
09:00-09:45 | Basics of next generation sequencing technology | A. Hoischen |
09:45-10:30 | Basics of NGS bioinformatics | C. Gilissen |
10:30-11:00 | Coffee break | |
11:00-11:45 | Syndromology in the NGS era | S. Douzgou Houge |
11:45-12:30 | Ethics in Genetics | A. Lucassen |
12:30-13:00 | Discussion of the morning lectures | |
13:00-14:00 | Lunch Break |
Afternoon Workshops
Session I 14:00 – 15:30 | ||
Bioinformatics Basics (Computer Room) | C. Gilissen | |
What if we sequenced everybody all of the time? | H. Brunner | |
Syndromology in the NGS era | S. Douzgou Houge | |
Copy number variants from exome sequencing | T. Pippucci | |
15:30-16:00 | Coffee Break | |
Session II 16:00 – 17:30 | ||
Bioinformatics Basics (Computer Room) | C. Gilissen | |
What if we sequenced everybody all of the time? | H. Brunner | |
Clinical Genetics in an NGS era | S. Douzgou Houge | |
Copy number variants from exome sequencing | T. Pippucci |
Tuesday, May 6, 2025 - Morning Lectures:
Novel disease mechanisms and therapy
08:55-09:00 | General Announcements | |
09:00-09:45 | Non-coding mutations/long-range effects | M. Spielmann |
09:45-10:30 | Cancer genomes | R. van Boxtel |
10:30-11:00 | Coffee break | |
11:00-11:45 | SMA: From gene and modifier to therapy | B. Wirth |
11:45-12:30 | Therapy and cancer | J. Burn |
12:30-13:00 | Discussion of the morning lectures | |
13:00-14:00 | Lunch Break |
Afternoon Workshops
Session I 14:00 – 15:30 | ||
Variant interpretation (Computer Room) | C. Gilissen & T. Pippucci | |
Genetic Counselling what’s the point? | J. Burn | |
Non-coding mutations | M. Spielmann | |
Genetic Imprinting | K. Temple | |
15:30-16:00 | Coffee Break | |
Session II 16:00 – 17:30 | ||
Variant interpretation (Computer Room) | C. Gilissen & T. Pippucci | |
Genetic Counselling what’s the point? | J. Burn | |
Non-coding mutations | M. Spielmann | |
From genes to function | B. Wirth | |
17:30 | Poster viewing session with aperitif (session I) |
Wednesday, May 7, 2025 - Morning Lectures:
Cancer and Cell-free DNA
08:55-09:00 | General Announcements | |
09:00-09:45 | Cancer genetics basics | C. Oliveira |
09:45-10:30 | Genetic Imprinting | K. Temple |
10:30-11:00 | Coffee break | |
11:00-11:45 | Cell-free DNA and its applications | E. Sistermans |
11:45-12:30 | Near-coding variants in rare disease | N. Whiffin |
12:30-13:00 | Discussion of the morning lectures | |
13:00-14:00 | Lunch Break |
Afternoon Excursion
Thursday, May 8, 2025 - Morning Lectures:
New Technologies and Big Data
08:55-09:00 | General Announcements | |
09:00-09:45 | Patterns of rare variation contributing to disease | K. Samocha |
09:45-10:30 | Long read sequencing technologies | E. Eichler |
10:30-11:00 | Coffee break | |
11:00-11:45 | Boundaries between rare and common disease | A. Reymond |
11:45-12:30 | Massively parallel functional assays | L. Starita |
12:30-13:00 | Discussion of the morning lectures | |
13:00-14:00 | Lunch Break |
Afternoon Workshops
Session I 14:00 – 15:30 | ||
Interpretation of rare variants | K. Samocha & N. Whiffin | |
Long read sequencing | E. Eichler | |
Cell-free DNA and its applications | E. Sistermans | |
Cancer Genetics basics | C. Oliveira | |
15:30-16:00 | Coffee Break | |
Session II 16:00 – 17:30 | ||
Interpretation of rare variants | K. Samocha & N. Whiffin | |
Long read sequencing | E. Eichler | |
Cell-free DNA and its applications | E. Sistermans | |
Cancer Genetics basics | C. Oliveira | |
17:30 | Poster viewing session with aperitif (session II) |
Social dinner and farewell party
Friday, May 8, 2025 - Morning Lectures:
Highlights of the 2025 course
08:55-09:00 | General Announcements | |
09:00-10:00 | McKusick-Romeo Lecture | S. Antonorakis |
10:00-10:30 | Coffee break | |
10:30-11:30 | Quiz on: “What have you learned”? | |
11:30-12:00 | Best poster pitches by students | |
12:00-13:00 | Lunch Break |
Departure after Lunch
Registration (virtual participation)
Registration Fee for virtual participation only
- EUR 50,-
- Deadline for registration is August 10, 2025. Please not that you have to register until May 4 if you want to submit questions for the Q&A and have them answered by the faculty.
Will the talks be available for an on-demand review?
- Yes, review of pre-recorded talks of the morning sessions (view programme above to see which talks will be made available) will be possible for registered participants until August 31, 2025 at 23.59hrs CEST.
Registration (on-site participation)
Registration for live participation
- EUR 980,-
- All participants are STRONGLY encouraged to present a poster. All abstracts will be accepted. Deadline for sending Abstracts or posters: April 14, 2025.
- You can find further information here.
Cancellation
Cancellations and refunds
Notice of cancellation must be made in writing by e-mail to the Congress Office:
bertinoro-course(at)eshg.org
Registration fees may be refunded if written cancellation has been received as follows:
until April 1, 2025: 50% refund
as of April 2, 2025: no refund
The cancellation will not be effective until a written acknowledgement from the Congress Office is received. In the case of over-payment or double payment, refund requests must be made in writing and sent to the Congress Office by e-mail. No refunds will be granted for unattended events or early termination of attendance, in case of cancellation of speakers or any other incidents during the conference, which are beyond the control of the conference organisers.
No exceptions to the refund policy can be made, including health or family issues. By registering to Virtual Edition of the Bertinoro Course 2025, participants agree that neither the organising committee nor the congress office assume any liability whatsoever.
Refunds will be made after the course.
Contact
Congress Office:
WMA GmbH
Ms. Magdalena Seidl
Alser Strasse 4
1090 Vienna, Austria
T: +43 1 405 13 83 24
F: +43 1 405 13 83 924
E: bertinoro-course(at)eshg.org